Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607745Ankyrin-3-like isoform X4. (4014 aa)    
Predicted Functional Partners:
FERMT2
Fermitin family homolog 2 isoform X2.
    
 
 0.784
LOC106611313
Ensconsin-like.
   
 0.736
LOC106577925
Myotubularin-like isoform X1.
     
 0.724
LOC106595961
PHD finger protein 20-like protein 1.
   
 
 0.719
sptan1
Spectrin alpha chain, non-erythrocytic 1 isoform X1.
   
 0.710
sptan1-2
Spectrin alpha chain, non-erythrocytic 1-like isoform X1.
   
 0.710
LOC106561308
CD44 antigen-like.
     
 0.708
LOC106573350
CD44 antigen-like.
     
 0.708
LOC106577826
Kelch-like protein 33.
     
 0.609
FIG4
Polyphosphoinositide phosphatase.
    
   0.602
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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