STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
un13dUnc-13 homolog D isoform X1. (1112 aa)    
Predicted Functional Partners:
LOC100194699
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
 0.522
tssc1
Protein TSSC1 isoform X2.
      
 0.476
ENSSSAP00000091433
EARP complex and GARP complex interacting protein 1.
      
 0.476
LOC106593073
Partner and localizer of BRCA2-like.
     
 0.444
LOC106564178
Partner and localizer of BRCA2-like.
     
 0.444
ENSSSAP00000020987
RAB27A, member RAS oncogene family.
    
 
 0.417
LOC106590748
Ras-related protein Rab-27B-like.
    
 
 0.417
LOC106585376
Ras-related protein Rab-27B-like.
    
 
 0.417
LOC106572338
Ras-related protein Rab-27B-like.
    
 
 0.417
LOC106585376-2
Ras-related protein Rab-27B-like.
    
 
 0.417
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.