STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106573415Carnitine O-palmitoyltransferase 1, liver isoform-like. (861 aa)    
Predicted Functional Partners:
cpt2
Carnitine O-palmitoyltransferase 2, mitochondrial.
  
 
0.933
LOC106585658
acetyl-CoA carboxylase 2-like isoform X5.
     
 0.918
acacb
acetyl-CoA carboxylase 2 isoform X2.
     
 0.918
LOC106584413
SH2 domain-containing adapter protein F-like.
      
 0.756
LOC100196527
SH2 domain-containing adapter protein D.
      
 0.753
pck2-2
Phosphoenolpyruvate carboxykinase [GTP], mitochondrial isoform X1.
      
 0.714
ACLY-2
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
      
 0.709
LOC106561989
Fructose-1,6-bisphosphatase 1-like; Belongs to the FBPase class 1 family.
      
 0.706
LOC106610003
long-chain-fatty-acid--CoA ligase 1-like isoform X1.
   
 
 0.706
LOC106599520
long-chain-fatty-acid--CoA ligase 3-like.
   
 
 0.698
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.