Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYP19A1 | LOC100136426 | ENSSSAP00000080365 | ENSSSAP00000099732 | Brain aromatase isoform X2; Belongs to the cytochrome P450 family. | Vitellogenin. | 0.796 |
CYP19A1 | LOC100846969 | ENSSSAP00000080365 | ENSSSAP00000012657 | Brain aromatase isoform X2; Belongs to the cytochrome P450 family. | Nuclear Progesterone receptor. | 0.700 |
CYP19A1 | brca1 | ENSSSAP00000080365 | ENSSSAP00000106017 | Brain aromatase isoform X2; Belongs to the cytochrome P450 family. | Breast cancer type 1 susceptibility protein isoform X2. | 0.510 |
CYP19A1 | esr1 | ENSSSAP00000080365 | ENSSSAP00000015760 | Brain aromatase isoform X2; Belongs to the cytochrome P450 family. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.818 |
CYP19A1 | med1 | ENSSSAP00000080365 | ENSSSAP00000044565 | Brain aromatase isoform X2; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.420 |
LOC100136426 | CYP19A1 | ENSSSAP00000099732 | ENSSSAP00000080365 | Vitellogenin. | Brain aromatase isoform X2; Belongs to the cytochrome P450 family. | 0.796 |
LOC100136426 | esr1 | ENSSSAP00000099732 | ENSSSAP00000015760 | Vitellogenin. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.816 |
LOC100846969 | CYP19A1 | ENSSSAP00000012657 | ENSSSAP00000080365 | Nuclear Progesterone receptor. | Brain aromatase isoform X2; Belongs to the cytochrome P450 family. | 0.700 |
LOC100846969 | LOC106567930 | ENSSSAP00000012657 | ENSSSAP00000107861 | Nuclear Progesterone receptor. | Nuclear receptor-interacting protein 1-like. | 0.775 |
LOC100846969 | LOC106603552 | ENSSSAP00000012657 | ENSSSAP00000091081 | Nuclear Progesterone receptor. | Nuclear receptor-interacting protein 1-like. | 0.775 |
LOC100846969 | LOC106608924 | ENSSSAP00000012657 | ENSSSAP00000003652 | Nuclear Progesterone receptor. | Histone acetyltransferase p300-like isoform X2. | 0.753 |
LOC100846969 | brca1 | ENSSSAP00000012657 | ENSSSAP00000106017 | Nuclear Progesterone receptor. | Breast cancer type 1 susceptibility protein isoform X2. | 0.710 |
LOC100846969 | esr1 | ENSSSAP00000012657 | ENSSSAP00000015760 | Nuclear Progesterone receptor. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.914 |
LOC100846969 | med1 | ENSSSAP00000012657 | ENSSSAP00000044565 | Nuclear Progesterone receptor. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.775 |
LOC100846969 | sp1 | ENSSSAP00000012657 | ENSSSAP00000011689 | Nuclear Progesterone receptor. | Transcription factor Sp1 isoform X2. | 0.404 |
LOC100846969 | xpp3 | ENSSSAP00000012657 | ENSSSAP00000005298 | Nuclear Progesterone receptor. | Histone acetyltransferase p300-like isoform X8. | 0.753 |
LOC106567930 | LOC100846969 | ENSSSAP00000107861 | ENSSSAP00000012657 | Nuclear receptor-interacting protein 1-like. | Nuclear Progesterone receptor. | 0.775 |
LOC106567930 | LOC106608924 | ENSSSAP00000107861 | ENSSSAP00000003652 | Nuclear receptor-interacting protein 1-like. | Histone acetyltransferase p300-like isoform X2. | 0.690 |
LOC106567930 | esr1 | ENSSSAP00000107861 | ENSSSAP00000015760 | Nuclear receptor-interacting protein 1-like. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.863 |
LOC106567930 | med1 | ENSSSAP00000107861 | ENSSSAP00000044565 | Nuclear receptor-interacting protein 1-like. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.490 |
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