STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ica1lIslet cell autoantigen 1-like protein. (51 aa)    
Predicted Functional Partners:
pick1
Salmo salar PRKCA-binding protein (pick1), mRNA.
    
 
 0.676
LOC106607154
PRKCA-binding protein-like.
    
 
 0.676
LOC106599584
Ras-related protein Rab-2A.
    
 
 0.628
rab2a
Salmo salar RAB2A, member RAS oncogene family (rab2a), mRNA.
    
 
 0.628
ccdc186
Coiled-coil domain-containing protein 186 isoform X1.
      
 0.581
LOC106611405
dnaJ homolog subfamily C member 27-like.
    
 
 0.508
LOC106605409
dnaJ homolog subfamily C member 27 isoform X2.
    
 
 0.508
adad1
Adenosine deaminase domain-containing protein 1 isoform X1.
      
 0.474
opa3
Optic atrophy 3 protein.
      
 0.438
LOC106561256
Dymeclin-like isoform X1.
      
 0.434
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.