STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604770Tubulin--tyrosine ligase-like isoform X1. (411 aa)    
Predicted Functional Partners:
LOC106561715
Enhancer of mRNA-decapping protein 3-like.
    
 
 0.800
EDC3
Enhancer of mRNA-decapping protein 3-like.
    
 
 0.800
LOC106587552
Enhancer of mRNA-decapping protein 3-like.
    
 
 0.800
tpgs2
Tubulin polyglutamylase complex subunit 2.
   
 0.783
nicn1
Nicolin-1.
   
 0.768
tpgs1
Tubulin polyglutamylase complex subunit 1.
    
 0.763
dcp2
m7GpppN-mRNA hydrolase isoform X1.
    
 
 0.746
LOC106562345
Leucine-rich repeat-containing protein 49-like isoform X1.
    
 0.736
LOC106587561
Leucine-rich repeat-containing protein 49-like isoform X1.
    
 0.736
tbc1d19
TBC1 domain family member 19.
   
 
 0.656
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.