STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106590654PR domain zinc finger protein 14-like. (564 aa)    
Predicted Functional Partners:
ENSSSAP00000025031
annotation not available
    
 0.795
cbfa2t2
Protein CBFA2T2 isoform X3.
    
 0.795
LOC106565304
Protein CBFA2T2-like.
    
 0.795
prdm6
Putative histone-lysine N-methyltransferase PRDM6 isoform X1.
    
 
0.734
LOC106567323
POU domain protein.
   
 0.721
LOC106563125
POU domain protein.
   
 0.721
lef1
Lymphoid enhancer-binding factor 1 isoform X5.
    
 0.623
LOC106572630
Sal-like protein 4 isoform X1.
    
0.606
ENSSSAP00000074617
Sal-like protein 4.
    
0.606
ENSSSAP00000046409
DNA (cytosine-5)-methyltransferase 3A-like.
    
 0.563
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.