STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106587947Tetraspanin. (298 aa)    
Predicted Functional Partners:
CD82
Tetraspanin.
  
  
 
0.902
cd37
Tetraspanin.
     
 
0.900
igsf8
Immunoglobulin superfamily member 8.
    
 
 0.554
LOC106573420
Tetraspanin.
   
 
0.521
LOC106561241
Tetraspanin.
   
 
0.521
LOC106591388
Neutrophil cytosol factor 4-like.
   
  
 0.515
Spd2a
SH3 and PX domain-containing protein 2A.
   
  
 0.515
LOC106567183
Tetraspanin.
    
 
0.514
cd63
Tetraspanin.
    
 
0.514
LOC100136451
CD8 beta precursor.
      
 0.495
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.