STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106589533Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (795 aa)    
Predicted Functional Partners:
LOC106583348
Citrate synthase; Belongs to the citrate synthase family.
  
 0.996
LOC106572524
Citrate synthase; Belongs to the citrate synthase family.
  
 0.996
LOC106567176
Citrate synthase; Belongs to the citrate synthase family.
  
 0.996
idh3a
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.994
LOC106595310
Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like.
  
 0.994
LOC106586335
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.993
LOC106582376
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.993
idhp
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.992
ENSSSAP00000071725
Isocitrate dehydrogenase [NADP], mitochondrial-like.
  
 0.992
LOC106572708
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.980
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.