STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563521Probable methyltransferase-like protein 15 isoform X1. (394 aa)    
Predicted Functional Partners:
mrps6
28S ribosomal protein S6, mitochondrial.
    
 
 0.953
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.942
mrps10
28S ribosomal protein S10, mitochondrial.
  
 
 0.941
mrps18b
28S ribosomal protein S18b, mitochondrial.
    
 
 0.914
ptcd3
LOW QUALITY PROTEIN: pentatricopeptide repeat domain-containing protein 3, mitochondrial.
    
 
 0.903
mrps27
28S ribosomal protein S27, mitochondrial.
    
 
 0.896
mrps31
28S ribosomal protein S31, mitochondrial.
    
   0.891
mrps26
28S ribosomal protein S26, mitochondrial.
    
   0.891
mrps25
28S ribosomal protein S25, mitochondrial.
    
   0.891
pusl1
tRNA pseudouridine synthase.
   
 
 0.822
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.