STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607295Signal transducer and activator of transcription. (784 aa)    
Predicted Functional Partners:
LOC106590362
Receptor protein-tyrosine kinase.
    
 0.965
LOC106600426
Receptor protein-tyrosine kinase.
    
 0.964
jak3
Tyrosine-protein kinase.
    
 0.911
irf9
Interferon regulatory factor 9 isoform X1.
   
 0.909
LOC106590411
Interferon regulatory factor 8-like isoform X1.
   
 0.909
jak2
Tyrosine-protein kinase.
    
 0.908
TYK2
Tyrosine-protein kinase.
    
 0.901
LOC106607218
Tyrosine-protein kinase.
    
 0.901
sta5b
Signal transducer and activator of transcription.
  
  
 
0.900
LOC106579144
Signal transducer and activator of transcription.
  
  
 
0.900
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.