STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000021941annotation not available (146 aa)    
Predicted Functional Partners:
snw1
LOW QUALITY PROTEIN: SNW domain-containing protein 1.
   
 
 0.750
SNW1
SNW domain-containing protein 1-like.
   
 
 0.750
ccd49
Coiled-coil domain-containing protein 49.
   
 
 0.748
LOC106587943
pre-mRNA-splicing factor CWC25 homolog.
   
 
 0.748
LOC106562086
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like isoform X1.
   
 
 0.712
LOC106587179
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like isoform X1.
   
 
 0.712
LOC100380699
pre-mRNA-processing-splicing factor 8.
    
 
 0.706
LOC106612861
pre-mRNA-processing-splicing factor 8-like.
    
 
 0.706
LOC106604441
NF-kappa-B-activating protein-like.
   
 
 0.671
NKAPL
NF-kappa-B-activating protein-like.
   
 
 0.671
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.