STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000023911annotation not available (93 aa)    
Predicted Functional Partners:
cxl13
C-X-C motif chemokine 13 precursor.
   
 0.600
LOC106607873
C-X-C motif chemokine 13-like.
   
 0.600
LOC106608548
C-C motif chemokine.
   
 0.580
ENSSSAP00000068999
annotation not available
   
 0.580
LOC106608883
Growth-regulated alpha protein-like.
    
 0.509
LOC106589772
Stromal cell-derived factor 1-like; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.504
SDF1
Stromal cell-derived factor 1 precursor; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.504
LOC106604225
Stromal cell-derived factor 1-like; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.504
cxcl12
C-X-C motif chemokine ligand 12.
   
 0.504
LOC106608877
Permeability factor 2-like.
   
 0.482
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.