STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601131Protein Wnt-9b-like. (383 aa)    
Predicted Functional Partners:
LOC106568975
Integral membrane protein GPR177.
    
 0.845
gp177
Integral membrane protein GPR177.
    
 0.845
gjd2
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.789
GJA1
Gap junction protein alpha 1.
      
 0.789
LOC106565657
Cyclin-dependent kinase inhibitor 1-like isoform X2.
      
 0.786
LOC106582441
L-dopachrome tautomerase-like.
    
 
 0.725
tyrp-1
5,6-dihydroxyindole-2-carboxylic acid oxidase isoform X1.
    
 
 0.722
PCDHAC2
Protocadherin alpha-C2-like.
    
 
 0.709
LOC106611341
Intersectin-2-like.
    
  0.665
ENSSSAP00000067020
Intersectin 2b.
    
  0.665
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.