Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC106562816 | pot1 | ENSSSAP00000029302 | ENSSSAP00000094520 | Telomeric repeat-binding factor 2-like isoform X2. | Protection of telomeres protein 1 isoform X1. | 0.612 |
LOC106562816 | rad50 | ENSSSAP00000029302 | ENSSSAP00000101925 | Telomeric repeat-binding factor 2-like isoform X2. | DNA repair protein RAD50. | 0.518 |
LOC106562816 | rfc3 | ENSSSAP00000029302 | ENSSSAP00000001532 | Telomeric repeat-binding factor 2-like isoform X2. | Replication factor C subunit 3 isoform X1. | 0.420 |
LOC106562816 | tert | ENSSSAP00000029302 | ENSSSAP00000058200 | Telomeric repeat-binding factor 2-like isoform X2. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.452 |
LOC106562816 | wrn | ENSSSAP00000029302 | ENSSSAP00000037318 | Telomeric repeat-binding factor 2-like isoform X2. | Werner syndrome ATP-dependent helicase isoform X2. | 0.596 |
pot1 | LOC106562816 | ENSSSAP00000094520 | ENSSSAP00000029302 | Protection of telomeres protein 1 isoform X1. | Telomeric repeat-binding factor 2-like isoform X2. | 0.612 |
pot1 | rad50 | ENSSSAP00000094520 | ENSSSAP00000101925 | Protection of telomeres protein 1 isoform X1. | DNA repair protein RAD50. | 0.693 |
pot1 | rfc3 | ENSSSAP00000094520 | ENSSSAP00000001532 | Protection of telomeres protein 1 isoform X1. | Replication factor C subunit 3 isoform X1. | 0.867 |
pot1 | tert | ENSSSAP00000094520 | ENSSSAP00000058200 | Protection of telomeres protein 1 isoform X1. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.995 |
pot1 | wrn | ENSSSAP00000094520 | ENSSSAP00000037318 | Protection of telomeres protein 1 isoform X1. | Werner syndrome ATP-dependent helicase isoform X2. | 0.971 |
rad50 | LOC106562816 | ENSSSAP00000101925 | ENSSSAP00000029302 | DNA repair protein RAD50. | Telomeric repeat-binding factor 2-like isoform X2. | 0.518 |
rad50 | pot1 | ENSSSAP00000101925 | ENSSSAP00000094520 | DNA repair protein RAD50. | Protection of telomeres protein 1 isoform X1. | 0.693 |
rad50 | rfc3 | ENSSSAP00000101925 | ENSSSAP00000001532 | DNA repair protein RAD50. | Replication factor C subunit 3 isoform X1. | 0.847 |
rad50 | tert | ENSSSAP00000101925 | ENSSSAP00000058200 | DNA repair protein RAD50. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.721 |
rad50 | wrn | ENSSSAP00000101925 | ENSSSAP00000037318 | DNA repair protein RAD50. | Werner syndrome ATP-dependent helicase isoform X2. | 0.991 |
rfc3 | LOC106562816 | ENSSSAP00000001532 | ENSSSAP00000029302 | Replication factor C subunit 3 isoform X1. | Telomeric repeat-binding factor 2-like isoform X2. | 0.420 |
rfc3 | pot1 | ENSSSAP00000001532 | ENSSSAP00000094520 | Replication factor C subunit 3 isoform X1. | Protection of telomeres protein 1 isoform X1. | 0.867 |
rfc3 | rad50 | ENSSSAP00000001532 | ENSSSAP00000101925 | Replication factor C subunit 3 isoform X1. | DNA repair protein RAD50. | 0.847 |
rfc3 | wrn | ENSSSAP00000001532 | ENSSSAP00000037318 | Replication factor C subunit 3 isoform X1. | Werner syndrome ATP-dependent helicase isoform X2. | 0.956 |
tert | LOC106562816 | ENSSSAP00000058200 | ENSSSAP00000029302 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | Telomeric repeat-binding factor 2-like isoform X2. | 0.452 |
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