STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000029323annotation not available (89 aa)    
Predicted Functional Partners:
LOC106609128
Regulator of nonsense transcripts 2-like isoform X3.
    
 
 0.925
ENSSSAP00000088686
annotation not available
    
 
 0.925
LOC106600666
Serine/arginine repetitive matrix protein 2-like.
   
 0.924
ENSSSAP00000003490
Serine/arginine repetitive matrix protein 2-like.
   
 0.924
LOC106583906
Serine/arginine repetitive matrix protein 2-like isoform X1.
   
 0.924
upf3b
Regulator of nonsense transcripts 3B.
    
 0.905
LOC106581644
Regulator of nonsense transcripts 3A-like isoform X3.
    
 0.905
LOC106567443
Transcription elongation regulator 1-like isoform X2.
   
 0.905
LOC106611515
Regulator of nonsense transcripts 3B-like.
    
 0.905
TCERG1
Transcription elongation regulator 1-like.
   
 0.905
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.