STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608636Amino acid transporter. (522 aa)    
Predicted Functional Partners:
slc3a1
Neutral and basic amino acid transport protein rBAT.
   
 
 0.768
SLC7A9
B0,+-type amino acid transporter 1.
   
  
 0.684
LOC106570711
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 0.615
slc38a9
Sodium-coupled neutral amino acid transporter 9.
    
 
 0.587
slc39a6
Zinc transporter ZIP6.
  
 
 0.574
slc39a10
Zinc transporter ZIP10 isoform X1.
  
 
 0.574
LOC106573635
Large neutral amino acids transporter small subunit 1-like.
   
  
 0.563
ENSSSAP00000095582
Solute carrier family 7 member 5.
   
  
 0.563
PepT1
Solute carrier family 15 member 1.
   
 
 0.552
ENSSSAP00000051274
Solute carrier family 6 (neurotransmitter transporter) member 19.
  
  
 0.552
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.