STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106571684Cell division cycle-associated protein 4-like isoform X2. (292 aa)    
Predicted Functional Partners:
SERTAD2-2
SERTA domain-containing protein 2-like.
  
   
 0.716
LOC106582227
A-kinase anchor protein 17A-like.
      
 0.642
LOC106586509
A-kinase anchor protein 17A-like.
      
 0.642
asmtl
N-acetylserotonin O-methyltransferase-like protein isoform X1.
      
 0.621
itgbl1
Integrin beta-like protein 1.
      
 0.595
jade1
Protein Jade-1.
      
 0.585
PPP2R2C
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
   0.581
PPP2R2C-2
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
   0.581
LOC106581644
Regulator of nonsense transcripts 3A-like isoform X3.
      
 0.576
LOC106586023
Regulator of nonsense transcripts 3A-like isoform X4.
      
 0.576
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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