STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDE1Glycerophosphodiester phosphodiesterase 1-like. (300 aa)    
Predicted Functional Partners:
l2hgdh
L-2-hydroxyglutarate dehydrogenase, mitochondrial.
    
 0.705
ENSSSAP00000022907
annotation not available
  
 0.576
LOC106574870
Glycerol-3-phosphate dehydrogenase, mitochondrial-like isoform X2.
  
 0.576
gpd2
Glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1.
  
 0.576
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
 0.576
LOC106569475
Abhydrolase domain-containing protein 4-like isoform X1.
   
  
 0.442
ttf2
Transcription termination factor 2 isoform X1.
    
  0.436
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 
 0.428
mgll
Monoglyceride lipase.
    
 0.426
LOC106566779
Monoglyceride lipase-like isoform X1.
    
 0.426
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.