STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106578038SLAM family member 9-like isoform X1. (310 aa)    
Predicted Functional Partners:
sh21a
SH2 domain-containing protein 1A.
   
 0.731
LOC106567801
SH2 domain-containing protein 1A-like.
   
 0.731
pold2
DNA polymerase subunit delta-2.
    
 0.718
ENSSSAP00000042990
annotation not available
    
 0.703
LOC106590498
SH2 domain-containing protein 1A-like.
   
 0.688
LOC106579497
SH2 domain-containing protein 1B-like.
   
 0.688
mus81
Crossover junction endonuclease MUS81.
    
 0.656
ENSSSAP00000102908
annotation not available
    
 0.603
ddx20
Probable ATP-dependent RNA helicase DDX20.
   
 0.600
LOC106601920
DNA polymerase delta catalytic subunit-like.
   
 0.581
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.