STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lypd2Ly6/PLAUR domain-containing protein 2 precursor. (151 aa)    
Predicted Functional Partners:
LOC106613062
Uncharacterized protein LOC106613062.
   
 0.506
4f2
4F2 cell-surface antigen heavy chain.
   
 0.496
kiaa0513
Uncharacterized protein KIAA0513 homolog isoform X1.
   
 0.496
slc3a1
Neutral and basic amino acid transport protein rBAT.
   
 0.496
calm2-3
4F2 cell-surface antigen heavy chain.
   
 0.496
LOC106578137
4F2 cell-surface antigen heavy chain-like isoform X3.
   
 0.496
alkbh2
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 isoform X1.
   
 0.496
LOC106603161
4F2 cell-surface antigen heavy chain-like.
   
 0.496
LOC100136478
Alpha-amylase.
   
 0.492
LOC106578483
Alpha-amylase.
   
 0.492
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.