STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icalCalpastatin isoform X3. (970 aa)    
Predicted Functional Partners:
LOC106608991
Calpain-1 catalytic subunit-like isoform X1; Belongs to the peptidase C2 family.
   
 0.837
LOC106565008
Calpain-1 catalytic subunit-like; Belongs to the peptidase C2 family.
   
 0.799
LOC106589958
Calpain-1 catalytic subunit-like; Belongs to the peptidase C2 family.
   
 0.799
capn10
Calpain-10; Belongs to the peptidase C2 family.
    
 0.797
LOC106578020
Calpain-1 catalytic subunit-like; Belongs to the peptidase C2 family.
   
 0.790
LOC106611380
Calpain-1 catalytic subunit-like; Belongs to the peptidase C2 family.
   
 0.786
LOC106609151
Calpain-1 catalytic subunit-like; Belongs to the peptidase C2 family.
   
 0.786
capns1
Calpain small subunit 1.
   
 0.773
CAPNS1
Calpain small subunit 1.
   
 0.773
ENSSSAP00000046744
Calpain small subunit 1-like.
   
 0.773
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.