STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM53BProtein FAM53B-like. (451 aa)    
Predicted Functional Partners:
LOC100196502
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.563
LOC106592010
Cytoplasmic FMR1-interacting protein 2-like.
      
 0.563
ENSSSAP00000022851
annotation not available
      
 0.495
ENSSSAP00000108907
Eotaxin-like.
      
 0.465
LOC106590516
Eotaxin-like.
      
 0.465
LOC106571455
Protein cornichon homolog 3-like isoform X3.
      
 0.459
LOC106563472
Protein cornichon homolog 2-like isoform X1.
      
 0.459
LOC106603137
Protein cornichon homolog 2.
      
 0.459
LOC106571455-2
Protein cornichon homolog 3-like isoform X1.
      
 0.459
zgpat
Zinc finger CCCH-type with G patch domain-containing protein; Transcription repressor that specifically binds the 5'- GGAG[GA]A[GA]A-3' consensus sequence. Represses transcription by recruiting the chromatin multiprotein complex NuRD to target promoters. Negatively regulates expression of EGFR, a gene involved in cell proliferation, survival and migration (By similarity).
      
 0.422
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.