STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611550Transmembrane anterior posterior transformation protein 1 homolog isoform X1. (603 aa)    
Predicted Functional Partners:
ENSSSAP00000017343
Leptin a.
      
 0.681
LOC106600415
SUN domain-containing ossification factor-like isoform X2.
    
   0.638
LOC106584226
SUN domain-containing ossification factor-like.
    
   0.638
LOC106613974
SUN domain-containing ossification factor-like isoform X1.
    
   0.638
LOC106569417
SUN domain-containing ossification factor-like isoform X3.
    
   0.638
LOC106561227
Uncharacterized protein LOC106561227.
      
 0.627
haus3
HAUS augmin-like complex subunit 3.
      
 0.594
nsun7
Putative methyltransferase NSUN7 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.594
spp2
Secreted phosphoprotein 24; Could coordinate an aspect of bone turnover.
   
  
 0.526
ENSSSAP00000016112
annotation not available
   
  
 0.526
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.