STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ranbp9Ran-binding protein 9 isoform X1. (614 aa)    
Predicted Functional Partners:
ct011
C20orf11 homolog.
   
 
 0.932
LOC106595952
Armadillo repeat-containing protein 8-like.
   
 
 0.932
ENSSSAP00000052407
Armadillo repeat containing 8.
   
 
 0.932
armc8
Armadillo repeat-containing protein 8 isoform X1.
   
 
 0.932
LOC106567219
Glucose-induced degradation protein 8 homolog.
   
 
 0.932
LOC106572460
Glucose-induced degradation protein 8 homolog.
   
 
 0.932
LOC106607896
WD repeat-containing protein 26-like isoform X2.
   
 
 0.929
LOC106571480
WD repeat-containing protein 26 isoform X2.
   
 
 0.929
WDR26
WD repeat-containing protein 26-like.
   
 
 0.929
LOC106584119
WD repeat-containing protein 26-like.
   
 
 0.929
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.