STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106581182Hepatocyte nuclear factor 1-beta-A-like isoform X1. (582 aa)    
Predicted Functional Partners:
hnf1a
Hepatocyte nuclear factor 1-alpha; Transcriptional activator that regulates the tissue specific expression of multiple genes, especially in pancreas and liver (By similarity). Binds to the promoter of the albumin gene; Belongs to the HNF1 homeobox family.
  
 
0.757
ENSSSAP00000027810
annotation not available
   
 
0.752
LOC106585312
Hepatocyte nuclear factor 1-alpha-like.
   
 
0.752
phs
Pterin-4-alpha-carbinolamine dehydratase.
    
 
 0.578
LOC106576922
Pterin-4-alpha-carbinolamine dehydratase-like.
    
 
 0.578
LOC106599594
Pancreas transcription factor 1 subunit alpha-like.
     
 0.576
LOC106569290
Pancreas transcription factor 1 subunit alpha.
     
 0.576
LOC106567096
Hepatocyte nuclear factor 4-alpha-like isoform X2.
   
 0.497
LOC106590549
Hepatocyte nuclear factor 4-gamma-like isoform X2.
   
 0.497
LOC106572609
Hepatocyte nuclear factor 4-alpha-like isoform X2.
   
 0.497
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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