STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106597143Chromodomain Y-like protein. (594 aa)    
Predicted Functional Partners:
scp2
Non-specific lipid-transfer protein isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.927
LOC106584059
Non-specific lipid-transfer protein-like isoform X1.
  
 0.927
ENSSSAP00000046725
Non-specific lipid-transfer protein-like.
  
 0.927
hsdl2
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
  
 0.890
ENSSSAP00000024442
annotation not available
   
 0.848
ENSSSAP00000026028
annotation not available
   
 0.848
ENSSSAP00000027229
annotation not available
   
 0.848
LOC106567479
Histone-lysine N-methyltransferase EHMT1-like isoform X5.
   
 0.848
LOC106563135
Histone-lysine N-methyltransferase EHMT1-like isoform X2.
   
 0.848
LOC106566827
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.848
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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