STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfpm1Zinc finger protein ZFPM1 isoform X1. (1207 aa)    
Predicted Functional Partners:
gata1
GATA-binding factor 1.
   
 0.934
LOC106582882
GATA-binding factor 2-like isoform X2.
   
 0.934
LOC106600428
GATA-binding factor 6-B-like isoform X1.
   
 0.748
LOC106572125
Transcription factor GATA-5-like.
   
 0.748
gata4
Transcription factor GATA-4.
   
 0.748
LOC106566420
Transcription factor GATA-5-like.
   
 0.748
LOC106569316
GATA-binding factor 6-B-like.
   
 0.748
rbbp4
Histone-binding protein RBBP4.
    
 0.685
LOC106581094
Histone-binding protein RBBP4-like.
    
 0.685
LOC106597495
Histone-binding protein RBBP7-like.
    
 0.685
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.