STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRX1Paired mesoderm homeobox protein 1-like isoform X2. (241 aa)    
Predicted Functional Partners:
ENSSSAP00000019940
annotation not available
      
 0.598
LOC106614011
Uncharacterized protein LOC106614011.
      
 0.598
ubxn11
UBX domain-containing protein 11 isoform X2.
      
 0.515
LOC106613997
Hematopoietically-expressed homeobox protein hhex-like.
      
 0.483
hhex
Hematopoietically-expressed Homeobox protein hhex.
      
 0.483
LOC106585180
Zinc finger protein 366-like.
    
 
 0.478
LOC106580564
Zinc finger protein 366-like isoform X2.
    
 
 0.478
LOC106577046
Vitamin K epoxide reductase complex subunit 1-like protein 1.
      
 0.469
LHX3
LIM/homeobox protein Lhx3-like isoform X1.
   
0.446
lhx3
LIM/homeobox protein Lhx3.
   
0.446
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.