STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDIA4Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family. (663 aa)    
Predicted Functional Partners:
ero1a
ERO1-like protein alpha.
   
 0.979
LOC106586106
ERO1-like protein beta isoform X1.
   
 0.979
LOC106567149
78 kDa glucose-regulated protein-like; Belongs to the heat shock protein 70 family.
  
 0.933
grp78
78 kDa glucose-regulated protein precursor; Belongs to the heat shock protein 70 family.
  
 0.933
LOC106602715
Microsomal triglyceride transfer protein large subunit-like.
   
 0.834
LOC106613685
Calreticulin.
   
 0.805
ENSSSAP00000027297
annotation not available
   
 0.805
LOC106599148
Calreticulin.
   
 0.805
LOC106569608
Calreticulin.
   
 0.805
LOC106613902
Calreticulin.
   
 0.805
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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