STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccm2Cerebral cavernous malformations 2 protein isoform X1. (510 aa)    
Predicted Functional Partners:
krit1
Krev interaction trapped protein 1 isoform X1.
    
 
 0.959
krit1-2
Krev interaction trapped protein 1.
    
 
 0.959
ENSSSAP00000074248
annotation not available
    
 
 0.908
ENSSSAP00000074493
Programmed cell death 10a.
    
 
 0.908
LOC106613246
Programmed cell death protein 10-like.
    
 
 0.908
LOC106574489
Programmed cell death protein 10-B-like.
    
 
 0.908
efcab2
EF-hand calcium-binding domain-containing protein 2 isoform X2.
    
 0.867
itgb1bp1
Integrin beta-1-binding protein 1 isoform X1.
    
 
 0.858
ENSSSAP00000001542
annotation not available
    
 0.783
map3k3
Mitogen-activated protein kinase kinase kinase 3.
    
 0.783
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.