STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1065722825-hydroxytryptamine receptor 6-like; Belongs to the G-protein coupled receptor 1 family. (407 aa)    
Predicted Functional Partners:
LOC106566693
Guanine nucleotide-binding protein G(S) subunit alpha-like.
    
 0.654
ENSSSAP00000025615
Guanine nucleotide-binding protein G(s) subunit alpha-like.
    
 0.654
LOC106590334
Guanine nucleotide-binding protein G(Olf) subunit alpha isoform X1.
    
 0.654
LOC106593968
Guanine nucleotide-binding protein G(S) subunit alpha-like.
    
 0.654
ENSSSAP00000066917
annotation not available
    
 0.654
ENSSSAP00000072725
annotation not available
    
 0.654
GNAL
Guanine nucleotide-binding protein G(olf) subunit alpha-like.
    
 0.654
LOC106596458
Guanine nucleotide-binding protein G(Olf) subunit alpha-like.
    
 0.640
ENSSSAP00000075486
Basigin.
    
 0.544
GNG2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.540
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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