STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap58Cilia- and flagella-associated protein 58. (882 aa)    
Predicted Functional Partners:
LOC106590510
IQ and AAA domain-containing protein 1-like isoform X1.
  
  
 0.679
maats1
Protein MAATS1.
   
 0.616
ENSSSAP00000102817
WD repeat domain 66.
    
 0.607
CFAP61
Cilia- and flagella-associated protein 61 isoform X1.
   
  
 0.605
ENSSSAP00000105229
annotation not available
   
  
 0.605
LOC106606420
Cilia- and flagella-associated protein 70-like.
      
 0.601
ttc29
Tetratricopeptide repeat protein 29.
      
 0.601
LOC106590692
Tetratricopeptide repeat protein 21B-like.
    
 
 0.601
cfap43
Cilia- and flagella-associated protein 43 isoform X1.
      
 0.601
armc2
Armadillo repeat-containing protein 2.
      
 0.600
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.