STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563186RNA-binding protein EWS-like isoform X1. (639 aa)    
Predicted Functional Partners:
hnrpm
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 0.832
LOC106573572
Heterogeneous nuclear ribonucleoprotein M-like isoform X1.
   
 0.832
dhx9
ATP-dependent RNA helicase A isoform X1.
   
 
 0.772
LOC106565996
TAR DNA-binding protein 43-like.
   
 0.760
LOC106566965
TAR DNA-binding protein 43-like.
   
 0.760
TADBP
TAR DNA-binding protein 43-like.
   
 0.760
tardbp
TAR DNA-binding protein 43 isoform X1.
   
 0.760
LOC106580094
Heterogeneous nuclear ribonucleoprotein K-like isoform X1.
   
 0.719
LOC106562047
Heterogeneous nuclear ribonucleoprotein K-like isoform X2.
   
 0.719
hnrnpk
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.719
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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