STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600885Sulfurtransferase. (296 aa)    
Predicted Functional Partners:
cgl
Cystathionine gamma-lyase.
  
 
 0.989
nfs1
Cysteine desulfurase, mitochondrial.
  
 0.989
suox
Sulfite oxidase, mitochondrial isoform X2.
    
 0.962
LOC106605166
Persulfide dioxygenase ETHE1, mitochondrial-like.
  
 
 0.939
LOC106582613
Persulfide dioxygenase ETHE1, mitochondrial-like.
  
 
 0.939
surf6
Kynurenine--oxoglutarate transaminase 1-like isoform X1.
     
 0.918
kat3
Kynurenine--oxoglutarate transaminase 3 isoform X1.
     
 0.918
ldha
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.913
ldhb
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.913
LOC106573069
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.913
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.