STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000050715annotation not available (187 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.647
LOC106571313
Ribosome production factor 2 homolog isoform X1.
   
 
 0.647
LOC106579528
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.618
nle1
Notchless protein homolog 1 isoform X1.
   
  
 0.535
grwd1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.526
ENSSSAP00000018028
annotation not available
   
  
 0.526
tsr2
Pre-rRNA-processing protein TSR2 homolog.
   
  
 0.524
RPL5
60S ribosomal protein L5.
    
 
 0.499
rpl5
60S ribosomal protein L5.
    
 
 0.499
LOC106568981
60S ribosomal protein L5-like.
    
 
 0.499
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.