STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM110BProtein FAM110B-like. (414 aa)    
Predicted Functional Partners:
aasdhppt
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X2.
      
 0.563
nsmaf
Protein FAN.
      
 0.522
LOC106569036
Centrosome and spindle pole-associated protein 1-like isoform X3.
      
 0.499
LOC106599453
Centrosome and spindle pole-associated protein 1-like isoform X2.
      
 0.499
slc2a12
Solute carrier family 2, facilitated glucose transporter member 12 isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.476
msantd4
myb/SANT-like DNA-binding domain-containing protein 4.
      
 0.459
LOC106581395
myb/SANT-like DNA-binding domain-containing protein 4 isoform X1.
      
 0.459
chchd7
Coiled-coil-helix-coiled-coil-helix domain-containing protein 7 isoform X1.
      
 0.453
ENSSSAP00000033152
annotation not available
      
 0.452
LOC106602680
Ankyrin repeat domain-containing protein 49-like.
      
 0.452
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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