STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106573465Telomere repeats-binding bouquet formation protein 1-like isoform X4. (328 aa)    
Predicted Functional Partners:
ENSSSAP00000089086
Telomere repeat binding bouquet formation protein 2.
    
 
 0.956
LOC106589358
SUN domain-containing protein 1-like isoform X4.
    
 
 0.550
LOC106601863
SUN domain-containing protein 1-like isoform X1.
    
 
 0.550
LOC106582675
Uncharacterized protein LOC106582675.
      
 0.540
LOC106605077
Zinc finger protein 407-like.
      
 0.477
LOC106571259
SUN domain-containing protein 1-like isoform X2.
    
 
 0.443
ENSSSAP00000040618
annotation not available
    
 
 0.443
ENSSSAP00000053037
annotation not available
    
 
 0.443
LOC106613552
SUN domain-containing protein 2-like.
    
 
 0.443
LOC106567817
Uncharacterized protein LOC106567817.
      
 0.422
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.