STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000053118annotation not available (289 aa)    
Predicted Functional Partners:
LOC106603316
Ankyrin repeat and SOCS box protein 12-like.
  
 
0.638
ift52
Intraflagellar transport protein 52 homolog.
    
 0.561
ENSSSAP00000072693
Ankyrin repeat and SOCS box-containing 12a.
   
 
 0.560
ift57
Intraflagellar transport protein 57 homolog isoform X1.
    
 0.548
ift80
LOW QUALITY PROTEIN: intraflagellar transport protein 80 homolog.
    
 0.547
ift172
Intraflagellar transport protein 172 homolog.
    
 0.543
LOC106585468
Intraflagellar transport protein 81 homolog.
    
 0.536
ENSSSAP00000109669
annotation not available
    
 0.536
commd9
COMM domain-containing protein 9.
   
  0.533
comd4
COMM domain-containing protein 4 isoform X1.
    
 0.527
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.