STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
groaGrowth-regulated alpha protein precursor. (109 aa)    
Predicted Functional Partners:
LOC106589772
Stromal cell-derived factor 1-like; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.965
SDF1
Stromal cell-derived factor 1 precursor; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.965
LOC106604225
Stromal cell-derived factor 1-like; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.965
cxcl12
C-X-C motif chemokine ligand 12.
   
 0.965
LOC106580715
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
0.960
cxl14
C-X-C motif chemokine 14 precursor.
    
 
 0.928
LOC106604935
C-X-C motif chemokine 14-like isoform X1.
    
 
 0.928
LOC106608548
C-C motif chemokine.
  
 0.851
ENSSSAP00000053215
annotation not available
   
0.847
LOC106577833
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
0.847
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.