STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10657716128S ribosomal protein S5, mitochondrial-like. (259 aa)    
Predicted Functional Partners:
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
  
 0.999
mrps6
28S ribosomal protein S6, mitochondrial.
   
 0.999
mrps10
28S ribosomal protein S10, mitochondrial.
  
 0.998
LOC106560988
28S ribosomal protein S35, mitochondrial-like.
   
 0.997
ENSSSAP00000073867
annotation not available
   
 0.997
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.997
mrps25
28S ribosomal protein S25, mitochondrial.
   
 0.997
Fau
Small subunit ribosomal protein S30e.
   
 0.996
LOC106574616
28S ribosomal protein S9, mitochondrial-like.
  
 0.996
rs30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.996
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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