Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC106579040 | PUS7 | ENSSSAP00000013262 | ENSSSAP00000055626 | LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog. | Pseudouridylate synthase 7 homolog isoform X1. | 0.945 |
LOC106579040 | mak16 | ENSSSAP00000013262 | ENSSSAP00000050204 | LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.999 |
LOC106579040 | mrpl3 | ENSSSAP00000013262 | ENSSSAP00000047379 | LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog. | 39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family. | 0.680 |
LOC106579040 | mtg1 | ENSSSAP00000013262 | ENSSSAP00000114704 | LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog. | Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.916 |
LOC106579040 | rbm28 | ENSSSAP00000013262 | ENSSSAP00000017317 | LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog. | RNA-binding protein 28. | 0.957 |
LOC106583459 | PUS7 | ENSSSAP00000035822 | ENSSSAP00000055626 | RNA pseudouridylate synthase domain-containing protein 4-like. | Pseudouridylate synthase 7 homolog isoform X1. | 0.843 |
LOC106583459 | gtpbp3 | ENSSSAP00000035822 | ENSSSAP00000031511 | RNA pseudouridylate synthase domain-containing protein 4-like. | tRNA modification GTPase GTPBP3, mitochondrial isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.955 |
LOC106583459 | gtpbp8 | ENSSSAP00000035822 | ENSSSAP00000101093 | RNA pseudouridylate synthase domain-containing protein 4-like. | GTP-binding protein 8. | 0.934 |
LOC106583459 | malsu1 | ENSSSAP00000035822 | ENSSSAP00000023668 | RNA pseudouridylate synthase domain-containing protein 4-like. | CG030 protein. | 0.953 |
LOC106583459 | mrpl3 | ENSSSAP00000035822 | ENSSSAP00000047379 | RNA pseudouridylate synthase domain-containing protein 4-like. | 39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family. | 0.907 |
LOC106583459 | mrpl43 | ENSSSAP00000035822 | ENSSSAP00000051651 | RNA pseudouridylate synthase domain-containing protein 4-like. | 39S ribosomal protein L43, mitochondrial. | 0.894 |
LOC106583459 | mtg1 | ENSSSAP00000035822 | ENSSSAP00000114704 | RNA pseudouridylate synthase domain-containing protein 4-like. | Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.943 |
PUS7 | LOC106579040 | ENSSSAP00000055626 | ENSSSAP00000013262 | Pseudouridylate synthase 7 homolog isoform X1. | LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog. | 0.945 |
PUS7 | LOC106583459 | ENSSSAP00000055626 | ENSSSAP00000035822 | Pseudouridylate synthase 7 homolog isoform X1. | RNA pseudouridylate synthase domain-containing protein 4-like. | 0.843 |
PUS7 | gtpbp3 | ENSSSAP00000055626 | ENSSSAP00000031511 | Pseudouridylate synthase 7 homolog isoform X1. | tRNA modification GTPase GTPBP3, mitochondrial isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.894 |
PUS7 | gtpbp8 | ENSSSAP00000055626 | ENSSSAP00000101093 | Pseudouridylate synthase 7 homolog isoform X1. | GTP-binding protein 8. | 0.891 |
PUS7 | mak16 | ENSSSAP00000055626 | ENSSSAP00000050204 | Pseudouridylate synthase 7 homolog isoform X1. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.841 |
PUS7 | malsu1 | ENSSSAP00000055626 | ENSSSAP00000023668 | Pseudouridylate synthase 7 homolog isoform X1. | CG030 protein. | 0.891 |
PUS7 | mrpl3 | ENSSSAP00000055626 | ENSSSAP00000047379 | Pseudouridylate synthase 7 homolog isoform X1. | 39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family. | 0.891 |
PUS7 | mrpl43 | ENSSSAP00000055626 | ENSSSAP00000051651 | Pseudouridylate synthase 7 homolog isoform X1. | 39S ribosomal protein L43, mitochondrial. | 0.894 |
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