STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106576800Cdc42 effector protein 3-like. (344 aa)    
Predicted Functional Partners:
rhoq
Rho-related GTP-binding protein RhoQ isoform X1.
    
 0.694
rhoh
Rho-related GTP-binding protein RhoH.
    
 0.694
rhoq-2
Rho-related GTP-binding protein RhoQ.
    
 0.694
SKP1
S-phase kinase associated protein 1.
      
 0.588
SKP1-2
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.588
LOC106602028
Cdc42 effector protein 4-like.
     
0.478
LOC106606328
Cdc42 effector protein 4-like.
     
0.478
LOC106610563
Cdc42 effector protein 4-like.
     
0.478
cdc42ep4
Cdc42 effector protein 4.
     
0.478
LOC106601177
Cdc42 effector protein 1-like.
     
0.454
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.