Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATP6 | ND3 | ENSSSAP00000000007 | ENSSSAP00000000009 | ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] | NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | 0.991 |
ATP6 | med31 | ENSSSAP00000000007 | ENSSSAP00000055865 | ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] | Solute carrier family 13 member 5. | 0.447 |
LOC106560874 | LOC106573701 | ENSSSAP00000050899 | ENSSSAP00000086665 | malonyl-CoA decarboxylase, mitochondrial-like. | malonyl-CoA decarboxylase, mitochondrial-like. | 0.900 |
LOC106560874 | med31 | ENSSSAP00000050899 | ENSSSAP00000055865 | malonyl-CoA decarboxylase, mitochondrial-like. | Solute carrier family 13 member 5. | 0.595 |
LOC106561167 | med31 | ENSSSAP00000109405 | ENSSSAP00000055865 | Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. | Solute carrier family 13 member 5. | 0.423 |
LOC106573701 | LOC106560874 | ENSSSAP00000086665 | ENSSSAP00000050899 | malonyl-CoA decarboxylase, mitochondrial-like. | malonyl-CoA decarboxylase, mitochondrial-like. | 0.900 |
LOC106573701 | med31 | ENSSSAP00000086665 | ENSSSAP00000055865 | malonyl-CoA decarboxylase, mitochondrial-like. | Solute carrier family 13 member 5. | 0.595 |
ND3 | ATP6 | ENSSSAP00000000009 | ENSSSAP00000000007 | NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] | 0.991 |
ND3 | med31 | ENSSSAP00000000009 | ENSSSAP00000055865 | NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | Solute carrier family 13 member 5. | 0.414 |
med31 | ATP6 | ENSSSAP00000055865 | ENSSSAP00000000007 | Solute carrier family 13 member 5. | ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] | 0.447 |
med31 | LOC106560874 | ENSSSAP00000055865 | ENSSSAP00000050899 | Solute carrier family 13 member 5. | malonyl-CoA decarboxylase, mitochondrial-like. | 0.595 |
med31 | LOC106561167 | ENSSSAP00000055865 | ENSSSAP00000109405 | Solute carrier family 13 member 5. | Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. | 0.423 |
med31 | LOC106573701 | ENSSSAP00000055865 | ENSSSAP00000086665 | Solute carrier family 13 member 5. | malonyl-CoA decarboxylase, mitochondrial-like. | 0.595 |
med31 | ND3 | ENSSSAP00000055865 | ENSSSAP00000000009 | Solute carrier family 13 member 5. | NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). | 0.414 |