Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYTB | FXN | ENSSSAP00000000014 | ENSSSAP00000046814 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | Frataxin. | 0.510 |
CYTB | LOC100194686 | ENSSSAP00000000014 | ENSSSAP00000041919 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | Frataxin, mitochondrial. | 0.510 |
CYTB | LOC100194699 | ENSSSAP00000000014 | ENSSSAP00000003546 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.982 |
CYTB | lyrm4b | ENSSSAP00000000014 | ENSSSAP00000057408 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | 0.931 |
CYTB | nfs1 | ENSSSAP00000000014 | ENSSSAP00000102444 | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | Cysteine desulfurase, mitochondrial. | 0.475 |
ENSSSAP00000070564 | FXN | ENSSSAP00000070564 | ENSSSAP00000046814 | Iron-sulfur cluster assembly enzyme. | Frataxin. | 0.981 |
ENSSSAP00000070564 | LOC100194686 | ENSSSAP00000070564 | ENSSSAP00000041919 | Iron-sulfur cluster assembly enzyme. | Frataxin, mitochondrial. | 0.981 |
ENSSSAP00000070564 | LOC100194699 | ENSSSAP00000070564 | ENSSSAP00000003546 | Iron-sulfur cluster assembly enzyme. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.525 |
ENSSSAP00000070564 | lyrm4b | ENSSSAP00000070564 | ENSSSAP00000057408 | Iron-sulfur cluster assembly enzyme. | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | 0.935 |
ENSSSAP00000070564 | nfs1 | ENSSSAP00000070564 | ENSSSAP00000102444 | Iron-sulfur cluster assembly enzyme. | Cysteine desulfurase, mitochondrial. | 0.999 |
ENSSSAP00000070564 | scly | ENSSSAP00000070564 | ENSSSAP00000027954 | Iron-sulfur cluster assembly enzyme. | Selenocysteine lyase. | 0.998 |
FXN | CYTB | ENSSSAP00000046814 | ENSSSAP00000000014 | Frataxin. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | 0.510 |
FXN | ENSSSAP00000070564 | ENSSSAP00000046814 | ENSSSAP00000070564 | Frataxin. | Iron-sulfur cluster assembly enzyme. | 0.981 |
FXN | LOC106564518 | ENSSSAP00000046814 | ENSSSAP00000012242 | Frataxin. | Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.981 |
FXN | LOC106568219 | ENSSSAP00000046814 | ENSSSAP00000115108 | Frataxin. | Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.981 |
FXN | lyrm4b | ENSSSAP00000046814 | ENSSSAP00000057408 | Frataxin. | LYR motif-containing protein 4B; Belongs to the complex I LYR family. | 0.972 |
FXN | nfs1 | ENSSSAP00000046814 | ENSSSAP00000102444 | Frataxin. | Cysteine desulfurase, mitochondrial. | 0.996 |
FXN | scly | ENSSSAP00000046814 | ENSSSAP00000027954 | Frataxin. | Selenocysteine lyase. | 0.991 |
LOC100194686 | CYTB | ENSSSAP00000041919 | ENSSSAP00000000014 | Frataxin, mitochondrial. | Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis. | 0.510 |
LOC100194686 | ENSSSAP00000070564 | ENSSSAP00000041919 | ENSSSAP00000070564 | Frataxin, mitochondrial. | Iron-sulfur cluster assembly enzyme. | 0.981 |
page 1 of 4