STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106577671Uncharacterized protein LOC106577671. (361 aa)    
Predicted Functional Partners:
cd79b
B-cell antigen receptor complex-associated protein beta chain isoform X2.
   
 0.692
LOC106595045
B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.
   
 0.513
LOC106577375
B-cell antigen receptor complex-associated protein alpha chain-like isoform X1.
   
 0.513
ENSSSAP00000021264
annotation not available
   
 0.513
LOC106595045-2
B-cell antigen receptor complex-associated protein alpha chain-like.
   
 0.513
C1QC-2
Complement C1q subcomponent subunit C-like.
   
  0.495
LOC106568295
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.474
ptn6
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.474
LOC106572187
Tyrosine-protein phosphatase non-receptor type 11-like.
    
 0.474
LOC106566948
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.474
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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