STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1IP1Mid1-interacting protein 1-B-like. (157 aa)    
Predicted Functional Partners:
ENSSSAP00000020312
Neurexophilin-2-like.
      
 0.739
LOC106582579
Neurexophilin-2-like isoform X1.
      
 0.739
thrsp
Thyroid hormone-inducible hepatic protein.
    
 
0.578
acoxl
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
      
 0.491
tatdn2
Putative deoxyribonuclease TATDN2.
      
 0.443
LOC106572236
asparagine--tRNA ligase, cytoplasmic-like.
      
 0.418
LOC106572196
asparagine--tRNA ligase, cytoplasmic-like.
      
 0.418
nars2
Probable asparagine--tRNA ligase, mitochondrial.
      
 0.418
NARS1-3
asparagine--tRNA ligase, cytoplasmic-like isoform X1.
      
 0.418
LOC106572095
cyclin-I-like isoform X2; Belongs to the cyclin family.
      
 0.416
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.