STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106579409Pituitary tumor-transforming gene 1 protein-interacting protein-like. (180 aa)    
Predicted Functional Partners:
LOC106574040
PDZK1-interacting protein 1-like.
      
 0.601
suox
Sulfite oxidase, mitochondrial isoform X2.
      
 0.599
ENSSSAP00000003310
annotation not available
      
 0.511
LOC106606214
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.511
ENSSSAP00000004330
annotation not available
    
 
 0.509
PTTG1
Pituitary tumor-transforming 1.
    
 
 0.509
LOC106574333
Junctional adhesion molecule B-like.
      
 0.428
LOC106575111
Junctional adhesion molecule B-like isoform X1.
      
 0.428
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.