STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600863Integrin alpha-3-like isoform X2; Belongs to the integrin alpha chain family. (1073 aa)    
Predicted Functional Partners:
Finc
Fibronectin 1.
    
 0.959
LOC106590025
Integrin beta; Belongs to the integrin beta chain family.
   
 0.947
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.946
ITGB1-2
Integrin beta; Belongs to the integrin beta chain family.
   
 0.946
LOC106582526
Fibronectin-like isoform X1.
     
 0.924
RELN
Reelin-like.
    
 0.919
itga3
Integrin alpha-3; Belongs to the integrin alpha chain family.
  
  
 
0.902
itgb4
Integrin beta.
   
 0.892
LOC106578871
Integrin beta.
   
 0.864
LOC106584357
Laminin subunit alpha-3-like.
   
 0.844
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.