STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vcanVersican core protein. (364 aa)    
Predicted Functional Partners:
LOC106605320
Brevican core protein-like isoform X1.
   
 
0.705
LOC106580754
Aggrecan core protein-like isoform X2.
   
 
0.705
LOC106580533
Tenascin-like isoform X1.
   
 0.661
LOC100380751
Tenascin isoform X1.
   
 0.661
LOC106567724
Tenascin-like isoform X1.
   
 0.661
SEMA6A
semaphorin-6A-like isoform X1; Belongs to the semaphorin family.
     
 0.642
SEMA6A-2
semaphorin-6A-like isoform X1; Belongs to the semaphorin family.
     
 0.642
layn
Layilin.
      
 0.630
ENSSSAP00000022977
Signal-induced proliferation-associated 1 like 1.
      
 0.626
LOC106561308
CD44 antigen-like.
    
0.624
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.